The original paper by J.J. Thompson, where he exposes his experiment to measure $m/e$ can be found here. (Note that Thompson actually measured $m/e$ whereas the modern discussion is in terms of $e/m$.) It seems clear from the text that distances are measured in centimeters, and voltages in Volts, but as far as I can tell, Thompson does not provide units for magnetic or electric fields, or charges.
According to tables 1-3 on page 306 of the journal, Thompson found consistent values of $m/e$ in the range of $\sim 10^{-8}$, with no units given. The current accepted value of $m/e$ is $5.68\times 10^{-12}$ kg/C so clearly there's some conversion factor somewhere.
Thus: What units of electric field, magnetic field, and charge did Thompson use in his historical experiment?